| { | |
| "schema": "https://github.com/Project-MONAI/MONAI-extra-test-data/releases/download/0.8.1/meta_schema_20240725.json", | |
| "version": "0.5.7", | |
| "changelog": { | |
| "0.5.7": "change sw padding mode to replicate", | |
| "0.5.6": "add mlflow support", | |
| "0.5.5": "add arg for trt compiler base path", | |
| "0.5.4": "add undefined label prompt check", | |
| "0.5.3": "update readme", | |
| "0.5.2": "fix eval issue", | |
| "0.5.1": "add description for zero-shot and upate eval", | |
| "0.5.0": "update json file link and add test", | |
| "0.4.9": "fix oom issue and update readme", | |
| "0.4.8": "use 0.3 overlap for inference", | |
| "0.4.7": "update tensorrt benchmark results", | |
| "0.4.6": "add tensorrt benchmark result and remove the metric part", | |
| "0.4.5": "remove wrong path", | |
| "0.4.4": "enable tensorrt inference", | |
| "0.4.3": "fix CL and batch infer issues", | |
| "0.4.2": "use MONAI components for network and utils", | |
| "0.4.1": "initial OSS version" | |
| }, | |
| "monai_version": "1.4.0", | |
| "pytorch_version": "2.4.0", | |
| "numpy_version": "1.24.4", | |
| "required_packages_version": { | |
| "matplotlib": "3.9.1", | |
| "einops": "0.7.0", | |
| "scikit-image": "0.23.2", | |
| "nibabel": "5.2.1", | |
| "pytorch-ignite": "0.4.11", | |
| "cucim-cu12": "24.6.0", | |
| "mlflow": "2.17.2" | |
| }, | |
| "supported_apps": { | |
| "vista3d-nim": "" | |
| }, | |
| "name": "VISTA3D", | |
| "task": "Decathlon Spleen segmentation", | |
| "description": "VISTA3D bundle", | |
| "authors": "MONAI team", | |
| "copyright": "Copyright (c) MONAI Consortium", | |
| "data_source": "Task09_Spleen.tar from http://medicaldecathlon.com/", | |
| "data_type": "nibabel", | |
| "image_classes": "1 channel data, intensity scaled to [0, 1]", | |
| "label_classes": "single channel data", | |
| "pred_classes": "2 channels OneHot data", | |
| "intended_use": "This is an example, not to be used for diagnostic purposes", | |
| "references": [], | |
| "network_data_format": { | |
| "inputs": { | |
| "image": { | |
| "type": "image", | |
| "format": "hounsfield", | |
| "modality": "CT", | |
| "num_channels": 1, | |
| "spatial_shape": [ | |
| 128, | |
| 128, | |
| 128 | |
| ], | |
| "dtype": "float32", | |
| "value_range": [ | |
| 0, | |
| 1 | |
| ], | |
| "is_patch_data": true, | |
| "channel_def": { | |
| "0": "image" | |
| } | |
| } | |
| }, | |
| "outputs": { | |
| "pred": { | |
| "type": "image", | |
| "format": "segmentation", | |
| "num_channels": 1, | |
| "spatial_shape": [ | |
| 128, | |
| 128, | |
| 128 | |
| ], | |
| "dtype": "float32", | |
| "value_range": [ | |
| 0, | |
| 1 | |
| ], | |
| "is_patch_data": true, | |
| "channel_def": { | |
| "0": "background", | |
| "1": "liver", | |
| "2": "kidney", | |
| "3": "spleen", | |
| "4": "pancreas", | |
| "5": "right kidney", | |
| "6": "aorta", | |
| "7": "inferior vena cava", | |
| "8": "right adrenal gland", | |
| "9": "left adrenal gland", | |
| "10": "gallbladder", | |
| "11": "esophagus", | |
| "12": "stomach", | |
| "13": "duodenum", | |
| "14": "left kidney", | |
| "15": "bladder", | |
| "16": "prostate or uterus", | |
| "17": "portal vein and splenic vein", | |
| "18": "rectum", | |
| "19": "small bowel", | |
| "20": "lung", | |
| "21": "bone", | |
| "22": "brain", | |
| "23": "lung tumor", | |
| "24": "pancreatic tumor", | |
| "25": "hepatic vessel", | |
| "26": "hepatic tumor", | |
| "27": "colon cancer primaries", | |
| "28": "left lung upper lobe", | |
| "29": "left lung lower lobe", | |
| "30": "right lung upper lobe", | |
| "31": "right lung middle lobe", | |
| "32": "right lung lower lobe", | |
| "33": "vertebrae L5", | |
| "34": "vertebrae L4", | |
| "35": "vertebrae L3", | |
| "36": "vertebrae L2", | |
| "37": "vertebrae L1", | |
| "38": "vertebrae T12", | |
| "39": "vertebrae T11", | |
| "40": "vertebrae T10", | |
| "41": "vertebrae T9", | |
| "42": "vertebrae T8", | |
| "43": "vertebrae T7", | |
| "44": "vertebrae T6", | |
| "45": "vertebrae T5", | |
| "46": "vertebrae T4", | |
| "47": "vertebrae T3", | |
| "48": "vertebrae T2", | |
| "49": "vertebrae T1", | |
| "50": "vertebrae C7", | |
| "51": "vertebrae C6", | |
| "52": "vertebrae C5", | |
| "53": "vertebrae C4", | |
| "54": "vertebrae C3", | |
| "55": "vertebrae C2", | |
| "56": "vertebrae C1", | |
| "57": "trachea", | |
| "58": "left iliac artery", | |
| "59": "right iliac artery", | |
| "60": "left iliac vena", | |
| "61": "right iliac vena", | |
| "62": "colon", | |
| "63": "left rib 1", | |
| "64": "left rib 2", | |
| "65": "left rib 3", | |
| "66": "left rib 4", | |
| "67": "left rib 5", | |
| "68": "left rib 6", | |
| "69": "left rib 7", | |
| "70": "left rib 8", | |
| "71": "left rib 9", | |
| "72": "left rib 10", | |
| "73": "left rib 11", | |
| "74": "left rib 12", | |
| "75": "right rib 1", | |
| "76": "right rib 2", | |
| "77": "right rib 3", | |
| "78": "right rib 4", | |
| "79": "right rib 5", | |
| "80": "right rib 6", | |
| "81": "right rib 7", | |
| "82": "right rib 8", | |
| "83": "right rib 9", | |
| "84": "right rib 10", | |
| "85": "right rib 11", | |
| "86": "right rib 12", | |
| "87": "left humerus", | |
| "88": "right humerus", | |
| "89": "left scapula", | |
| "90": "right scapula", | |
| "91": "left clavicula", | |
| "92": "right clavicula", | |
| "93": "left femur", | |
| "94": "right femur", | |
| "95": "left hip", | |
| "96": "right hip", | |
| "97": "sacrum", | |
| "98": "left gluteus maximus", | |
| "99": "right gluteus maximus", | |
| "100": "left gluteus medius", | |
| "101": "right gluteus medius", | |
| "102": "left gluteus minimus", | |
| "103": "right gluteus minimus", | |
| "104": "left autochthon", | |
| "105": "right autochthon", | |
| "106": "left iliopsoas", | |
| "107": "right iliopsoas", | |
| "108": "left atrial appendage", | |
| "109": "brachiocephalic trunk", | |
| "110": "left brachiocephalic vein", | |
| "111": "right brachiocephalic vein", | |
| "112": "left common carotid artery", | |
| "113": "right common carotid artery", | |
| "114": "costal cartilages", | |
| "115": "heart", | |
| "116": "left kidney cyst", | |
| "117": "right kidney cyst", | |
| "118": "prostate", | |
| "119": "pulmonary vein", | |
| "120": "skull", | |
| "121": "spinal cord", | |
| "122": "sternum", | |
| "123": "left subclavian artery", | |
| "124": "right subclavian artery", | |
| "125": "superior vena cava", | |
| "126": "thyroid gland", | |
| "127": "vertebrae S1", | |
| "128": "bone lesion", | |
| "129": "kidney mass", | |
| "130": "liver tumor", | |
| "131": "vertebrae L6", | |
| "132": "airway" | |
| } | |
| } | |
| } | |
| } | |
| } | |