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@@ -25,64 +25,10 @@ Synthetic Cases Dataset - Microbiome-based therapeutics
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  ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/HWkFyGbgD36QNI2-YZZVz.png)
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  ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/SnN6_1eaVB4kILJl7Gb5o.png)
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- # DEMO
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- Input: Patient Description
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/LSkgax0jNVeqggejFSSkr.png)
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- ## Extracting patient description and planning searches
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/xWoM7uS0Yt6rCk6L9w6Wz.png)
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- ## Teach AI to extract structured patient information
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- Prefilled with TrialMatchLLM extracted content, the expert user can adjust if needed:
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/PTNMHBPiEDkP62vxHJ9tT.png)
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- ## Planning and running eligibility check
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- TrialMatchLLM runs online searches using permutation of parameters from the patient description, from the most precise to expanded searches.
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/p4tCN7K1iE4BKAABy9C-s.png)
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- Hold your mouse over the icons to see the description
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/l39oMpOsRZ2y8EkGGuVTs.png)
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- ## Classified Trials
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/vZZL-v03j1wny7PlFnwt5.png)
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- ## Explanations to non-experts
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/C57TxBJKLN8p9sTvJ98H5.png)
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- ## Break down of AI thoughts and Obervations
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- ## Teach AI to make it perform better for you // Reinforcement Learning
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/OQZDkPiWVZkR1pXNjZT_Y.png)
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- ## Teach AI to simplify Trial Eligibility Assessment // Reinforcement Learning
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/zBZ1oFOkVYWD1ay0Aqpw6.png)
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- ## Annotated Eligiblity Criteria
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- Participan groups identifications, and inclusion/exclusion
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- ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/Zltj6IXMi-m2pkHcypRdl.png)
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  # Finetuning
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  template used for fine-tuning: https://colab.research.google.com/drive/1D6OsKMp2zI9b2EWb_dfH-3clEVo7A5QK?usp=sharing#scrollTo=ZYLl8EJmTRL2
 
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  ![image/png](https://cdn-uploads.huggingface.co/production/uploads/6569e9d4d9f52520c827a0b4/SnN6_1eaVB4kILJl7Gb5o.png)
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  # Finetuning
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  template used for fine-tuning: https://colab.research.google.com/drive/1D6OsKMp2zI9b2EWb_dfH-3clEVo7A5QK?usp=sharing#scrollTo=ZYLl8EJmTRL2