add possibility to run in container

annotation-preprocessing/Dockerfile

@@ -0,0 +1,13 @@
+FROM python:3.7
+
+WORKDIR /usr/src/app
+
+RUN apt-get update 
+RUN apt-get install libgl1 -y
+
+COPY requirements.txt ./
+RUN pip install --no-cache-dir -r requirements.txt
+
+COPY *.py .
+
+CMD sh -c "python 0_fetch_from_database.py && python 1_splitting_into_patches.py"

annotation-preprocessing/docker-compose.yml

@@ -0,0 +1,10 @@
+version: "3"  # optional since v1.27.0
+services:
+  preprocess:
+    build: .
+    volumes:
+      - ./out/:/usr/src/app/out:z
+      - ./in/:/usr/src/app/in:z
+    env_file:
+      - .env
+