import os import gradio as gr import torch from foldingdiff import sampling from foldingdiff import angles_and_coords as ac def sample_at_length(l:int, seed:int): """ Sample a single structure at the given length """ torch.manual_seed(seed) l = int(l) s = sampling.sample_simple("wukevin/foldingdiff_cath", n=1, sweep_lengths=(l, l+1))[0] # Create a PDB file outdir = os.path.join(os.getcwd(), "output") os.makedirs(outdir, exist_ok=True) pdb_file = ac.create_new_chain_nerf(os.path.join(outdir, "generated.pdb"), s) return s, pdb_file interface = gr.Interface( fn=sample_at_length, inputs=[ gr.Number(value=55, label="Protein backbone length to generate", show_label=True, precision=0), gr.Number(value=8964, label="Random seed", show_label=True, precision=0), ], outputs=[ gr.Dataframe(label="Generated angles defining structure", max_rows=8), gr.File(label="Generated structure in PDB format (cartesian coordinates)"), ], ) interface.launch()