minwoosun commited on
Commit
0a26430
·
verified ·
1 Parent(s): 74c9854

Revert to no md description

Browse files
Files changed (1) hide show
  1. app.py +35 -15
app.py CHANGED
@@ -125,12 +125,8 @@ def main(input_file_path, species):
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  return img, output_file
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-
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- if __name__ == "__main__":
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- # Read the Markdown content from the .md file
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- with open('description.md', 'r') as file:
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- description_md = file.read()
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  # Define Gradio inputs and outputs
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  file_input = gr.File(label="Upload a .h5ad single cell gene expression file")
@@ -139,14 +135,38 @@ if __name__ == "__main__":
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  file_output = gr.File(label="Download embeddings")
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  # Create the Gradio interface
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- with gr.Blocks() as demo:
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- gr.Markdown(description_md) # Add the Markdown section
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- # Create the Gradio interface
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- demo = gr.Interface(
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- fn=main,
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- inputs=[file_input, species_input],
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- outputs=[image_output, file_output],
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- title="UCE 100M Demo",
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- description="Upload a .h5ad single cell gene expression file, and get a UMAP scatter plot along with the UMAP coordinates in a CSV file."
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- ).launch()
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  return img, output_file
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+ if __name__ == "__main__":
 
 
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  # Define Gradio inputs and outputs
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  file_input = gr.File(label="Upload a .h5ad single cell gene expression file")
 
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  file_output = gr.File(label="Download embeddings")
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  # Create the Gradio interface
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+ demo = gr.Interface(
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+ fn=main,
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+ inputs=[file_input, species_input],
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+ outputs=[image_output, file_output],
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+ title="UCE 100M Demo",
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+ description="Upload a .h5ad single cell gene expression file, and get a UMAP scatter plot along with the UMAP coordinates in a CSV file."
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+ )
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+
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+ demo.launch()
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+
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+
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+ # if __name__ == "__main__":
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+
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+ # # Read the Markdown content from the .md file
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+ # with open('description.md', 'r') as file:
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+ # description_md = file.read()
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+
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+ # # Define Gradio inputs and outputs
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+ # file_input = gr.File(label="Upload a .h5ad single cell gene expression file")
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+ # species_input = gr.Dropdown(choices=["human", "mouse"], label="Select species")
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+ # image_output = gr.Image(type="numpy", label="UMAP of UCE Embeddings")
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+ # file_output = gr.File(label="Download embeddings")
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+
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+ # # Create the Gradio interface
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+ # with gr.Blocks() as demo:
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+ # gr.Markdown(description_md) # Add the Markdown section
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+ # # Create the Gradio interface
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+ # demo = gr.Interface(
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+ # fn=main,
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+ # inputs=[file_input, species_input],
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+ # outputs=[image_output, file_output],
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+ # title="UCE 100M Demo",
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+ # description="Upload a .h5ad single cell gene expression file, and get a UMAP scatter plot along with the UMAP coordinates in a CSV file."
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+ # ).launch()
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