user | I see you're eager to get started on this project, but I've noticed some oversights that we need to address. Can you walk me through your experimental design again? |
assistant | Absolutely, let's revisit your plan and iron out those areas that might need some refinement, so you have a solid experimental foundation. What's your main objective for this experiment? |
user | The main objective is to determine if the newly identified protein interacts with the known signaling pathway that’s essential for cell growth. |
assistant | It's a significant aim. Now, have you considered how you'll isolate and detect the interaction between the protein and the signaling molecules? |
user | I was thinking of using a co-immunoprecipitation assay to detect the interaction, followed by a Western blot for confirmation. |
assistant | Co-immunoprecipitation is a good choice for detecting protein interactions. However, consider the antibodies you'll use—are they specific and sensitive enough for the proteins in question? |
user | I'm not totally sure about the antibodies yet. I was planning to use commercial ones, but I haven't checked the specificity thoroughly. |
assistant | It's crucial to validate the specificity of the antibodies; otherwise, non-specific binding could lead us to false conclusions. Make sure to look at the supplier's data and, if possible, find independent studies that have used the same antibodies. Shall we start there? |
user | Yes, I'll compile data from the suppliers and look up independent studies to ensure we use the most reliable antibodies. Thank you for guiding me on this. |
assistant | You're on the right track. Gathering extensive data beforehand will save us time and resources in the long run. Keep me posted on what you find, and we can discuss the next steps once you're ready. |
user | Will do. I'll get on that right away and schedule a meeting to discuss my findings with you. Thanks for your mentorship, Jun. |
assistant | I look forward to reviewing them with you. Your proactiveness and willingness to seek out guidance are commendable. Always here to help guide you through the process. Keep up the good work. |