JadAssaf
commited on
Commit
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5a6f531
1
Parent(s):
3120adf
Init
Browse files- .DS_Store +0 -0
- TSPI_model.sav +0 -0
- app.py +53 -0
- load_model.py +4 -0
- requirements.txt +3 -0
- stpi_data.txt +1 -0
.DS_Store
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Binary file (6.15 kB). View file
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TSPI_model.sav
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Binary file (159 kB). View file
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app.py
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# %%
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import gradio as gr
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import pickle
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file_name = 'TSPI_model.sav'
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model = pickle.load(open(file_name,'rb'))
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def STPI(t_1_MaxValue,t_2_MaxValue,t_2_0_MaxValue,
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# Acc_0_5__1_0_MaxValue,
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Abs_Diff_t_1_MaxValue,Abs_Diff_t_2_MaxValue,Abs_Diff_t_4_MaxValue):
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print('------------------')
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X = [t_1_MaxValue,t_2_MaxValue,t_2_0_MaxValue,
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# Acc_0_5__1_0_MaxValue,
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Abs_Diff_t_1_MaxValue,Abs_Diff_t_2_MaxValue,Abs_Diff_t_4_MaxValue]
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print(X)
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outcome_decoded = ['Normal','Suspect','Keratoconic']
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file_object = open('stpi_data.txt', 'a')
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file_object.write(str(t_1_MaxValue))
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file_object.write(';')
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file_object.write(str(t_2_MaxValue))
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file_object.write(';')
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file_object.write(str(t_2_0_MaxValue))
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file_object.write(';')
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# file_object.write(str(Acc_0_5__1_0_MaxValue))
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# file_object.write(';')
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file_object.write(str(Abs_Diff_t_1_MaxValue))
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file_object.write(';')
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file_object.write(str(Abs_Diff_t_2_MaxValue))
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file_object.write(';')
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file_object.write(str(Abs_Diff_t_4_MaxValue))
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file_object.write(';')
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file_object.write('\n')
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file_object.close()
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result_3way = model.predict([X])
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print('The patient is ', outcome_decoded[int(result_3way)], 'through the 3way method')
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# result = 'The 3-way classification resulted in a ', outcome_decoded[int(result_3way)] + ' patient.'
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# further_analysis = 'Futher analysis using the 2-way classification resulted in a ' + outcome_decoded[int(result_2way)] + ' label.'
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return 'The patient is ' + outcome_decoded[int(result_3way)] + '.'
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iface = gr.Interface(
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fn=STPI,
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title='TSPI Calculator',
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description='The Thickness Speed Progression Index (TSPI) detects keratoconus and keratoconus susceptible corneas through summarized pachymetric parameters. Beta version made for Zeimer by Prof. Shady Awwad, Jad Assaf, MD, and Bassel Hammoud, MD.',
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inputs=["number", "number","number",
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# "number",
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"number", "number","number"],
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outputs="text")
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iface.launch(
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# share=True
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)
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# %%
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load_model.py
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import pickle
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file_name = 'TSPI_model.sav'
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model = pickle.load(open(file_name,'rb'))
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requirements.txt
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gradio==2.4.6
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joblib==1.0.0
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scikit-learn==0.24.0
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stpi_data.txt
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11.0;22.0;33.0;44.0;55.0;66.0;77.0
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