Update dash_plotly_QC_scRNA.py

dash_plotly_QC_scRNA.py

@@ -37,7 +37,7 @@ def read_config(filename):
 
 config = read_config(config_path)
 path_parquet = config.get("path_parquet")
-#conditions = config.get("conditions")
+col_batch = config.get("col_batch")
 col_features = config.get("col_features")
 col_counts = config.get("col_counts")
 col_mt = config.get("col_mt")
@@ -72,7 +72,7 @@ max_value_3 = round(max_value_3, 1)
 
 # Note: Future version perhaps all values from a column in the dataframe of the parquet file
 # Note 2: This could also be a tsv of the categories and own specified colors
-conditions = df[condition1_chosen].unique().tolist()
+conditions = df[col_batch].unique().tolist()
 # Create the first tab content
 # Add Sliders for three QC params: N genes by counts, total amount of reads and pct MT reads