--- license: apache-2.0 language: - en metrics: - meteor - bertscore - rouge library_name: transformers pipeline_tag: summarization tags: - medical - biomedical - scientific_papers - PEGASUS --- Extractive summarization, followed by abstractive summmarization. Extractive summarization performed via Top-K Sentence Cosine, in which the cosine similarity of sentence embeddings are compared. Abstractive summarization comes from the PEGASUS-X model, fine-tuned on Top-K Sentence Cosine summaries of papers from the eLife dataset. See attached paper for further details. Implemented for graduate course COSC-685 Advanced NLP, in collaboration with Zhiheng Wang, Ahmed Jaafar, and Jiarui Liu.