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PyBDC/README.md

@@ -30,7 +30,7 @@ Run PyBDC.
 python3 PyBDC.py
 ```
 
-PyBDC can also be run through its container available at https://huggingface.co/didsr/PyBDC-Container
+PyBDC can also be run through its container available at https://huggingface.co/didsr/PyBDC-Container, or by executing the shell script [run_container.sh](run_container.sh).
 
 User guide
 ----------

PyBDC/run_container.sh

@@ -0,0 +1,23 @@
+# !/bin/bash
+# Script to download the container and run PyBDC.
+# Assumption: the system is Unix based system and Apptainer (https://apptainer.org) is installed.
+
+# Clone PyBDC container from HuggingFace
+git clone https://huggingface.co/didsr/PyBDC-Container
+
+cd PyBDC-Container
+
+read -r -p "Are you providing PyBDC an incident spectrum? [y/N] " response
+case "$response" in
+    [yY][eE][sS]|[yY]) 
+        echo "Provide the parent directory path for the incident spectrum file: "
+        read directory_path
+        echo "Provided path: $directory_path"
+        echo "You can access the content of the provided directory in /mnt directory from PyBDC GUI"
+        apptainer run --bind $directory_path:/mnt ./PyBDC_container/PyBDC_container.sif
+        ;;
+    *)
+        echo "Incident spectrum files can be accessed from /usr/local/bin/PyBDC/incident_spectrum/"
+        apptainer run ./PyBDC_container/PyBDC_container.sif
+        ;;
+esac