# Copyright 2024 FBK # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # http://www.apache.org/licenses/LICENSE-2.0 # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License try: import pandas as pd except ImportError: print("Please install the pandas package with 'pip install pandas' and try again.") exit(1) import argparse _VERSION = "1.01" class ExplicitDefaultsHelpFormatter(argparse.ArgumentDefaultsHelpFormatter): def _get_help_string(self, action): if action.default is None or action.default is False: return action.help return super()._get_help_string(action) def main(args): """ This script flags (by setting True the corresponding entry of the hall_long_word column) those sentences where at least one word is abnormally long; the abnormality is set through the thresh parameter, whose default value is 40. """ if (parsed_args.version): print(f"Version {_VERSION} of anomalous string detector") exit(1) if not (tsv_files_specified): print("--tsv-InFile and --tsv-OutFile are both required") parser.print_usage() exit(1) inDF = pd.read_csv(args.tsv_InFile, sep='\t', dtype=str, low_memory=False, na_filter=False, quoting=3) try: txt = inDF[parsed_args.column] except KeyError: print("Error in reading column <"+parsed_args.column+"> in TSV file") exit(1) flag = [] for line in txt: anomal = False try: words = line.split() except TabError: words = [] for w in words: lw=len(w.strip()) if lw > parsed_args.thresh: if args.quiet: flag.append("True") else: flag.append("True ("+str(lw)+"): "+w.strip()) anomal = True break if not anomal: flag.append("False") inDF['hall_long_word'] = flag inDF.to_csv(args.tsv_OutFile, sep="\t", index=False, quoting=3) if __name__ == '__main__': parser = argparse.ArgumentParser(formatter_class=ExplicitDefaultsHelpFormatter) # I/O related arguments parser.add_argument( '--tsv-InFile', '-i', type=str, help="The input TSV file [Mandatory]") parser.add_argument( '--tsv-OutFile', '-o', type=str, help="The output TSV file [Mandatory. If equal to input TSV file, the new column is added to the original file]") # Processing arguments: parser.add_argument( '--column', '-c', default='source', help="Column name of the text to process [Optional]") parser.add_argument( '--thresh', '-t', type=int, default=40, help="Max number of chars of a string to be unflagged [Optional]") # Reporting related arguments parser.add_argument( '--quiet', '-q', default=False, action='store_true', help='Print only True/False, no explanation for True\'s') # Get version information: parser.add_argument( '--version', '-v', action='store_true', default=False, help="Print version of the script and exit") parsed_args = parser.parse_args() tsv_files_specified = \ getattr(parsed_args, 'tsv_InFile') is not None \ and len(parsed_args.tsv_InFile) > 0 \ and getattr(parsed_args, 'tsv_OutFile') is not None \ and len(parsed_args.tsv_OutFile) > 0 main(parsed_args)